STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_3634NADH dehydrogenase (quinone); KEGG: NADH/ubiquinone/plastoquinone (complex I); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase. (493 aa)    
Predicted Functional Partners:
Desaf_3631
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: Na+/H+ antiporter MnhB subunit-like protein.
 
 
 0.995
Desaf_3632
PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; KEGG: NADH-ubiquinone oxidoreductase subunit 4L.
 
 
 0.995
Desaf_3627
PFAM: cation antiporter; KEGG: cation antiporter.
 
 
 0.994
Desaf_3628
PFAM: Multiple resistance and pH regulation protein F; KEGG: multiple resistance and pH regulation protein F.
 
 
 0.994
Desaf_3629
PFAM: Na+/H+ antiporter subunit; KEGG: drt:Dret_0794 monovalent cation/proton antiporter, MnhG/PhaG subunit.
 
 
 0.994
Desaf_3630
KEGG: hypothetical protein.
 
 
 0.970
Desaf_3636
KEGG: shl:Shal_3363 hypothetical protein.
 
    0.906
Desaf_0585
NADH dehydrogenase (quinone); KEGG: dsa:Desal_3233 NADH/ubiquinone/plastoquinone (complex I); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal.
 
 
0.895
Desaf_0584
PFAM: NADH:ubiquinone oxidoreductase, subunit 1; KEGG: dsa:Desal_3234 respiratory-chain NADH dehydrogenase subunit 1.
 
 0.884
Desaf_0581
NADH dehydrogenase (quinone); KEGG: dsa:Desal_3237 NADH-ubiquinone oxidoreductase chain 49kDa; PFAM: NADH-quinone oxidoreductase, subunit D; Nickel-dependent hydrogenase, large subunit.
  
 
 0.878
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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