STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_3720KEGG: drt:Dret_2154 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component. (233 aa)    
Predicted Functional Partners:
Desaf_3719
ABC-type transporter, periplasmic subunit family 3; KEGG: dvm:DvMF_3152 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor.
 0.997
Desaf_3718
Phosphate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dsa:Desal_1519 ABC transporter related; SMART: ATPase, AAA+ type, core.
 0.995
Desaf_3721
KEGG: drt:Dret_2155 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component.
 
 
 
0.986
Desaf_1119
ABC-type transporter, periplasmic subunit family 3; KEGG: dde:Dde_3742 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor.
 
 0.984
Desaf_1731
ABC-type transporter, periplasmic subunit family 3; KEGG: dba:Dbac_1459 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3.
 
 0.984
Desaf_3653
ABC-type transporter, periplasmic subunit family 3; KEGG: dvl:Dvul_2548 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3.
 
 0.983
Desaf_3369
ABC-type transporter, periplasmic subunit family 3; KEGG: drt:Dret_2029 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor.
 
 0.932
Desaf_3368
Phosphate-transporting ATPase; PFAM: ABC transporter-like; KEGG: dvm:DvMF_2788 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 0.930
Desaf_1729
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: dba:Dbac_1461 ABC transporter related; SMART: ATPase, AAA+ type, core.
 
 0.929
Desaf_1117
Fe(3+)-transporting ATPase; PFAM: ABC transporter-like; KEGG: ABC transporter-like protein; SMART: ATPase, AAA+ type, core.
 
 0.928
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.