STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT32661.1Phosphoglycerate dehydrogenase. (356 aa)    
Predicted Functional Partners:
GAT32500.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.875
GAT31887.1
FAD/FMN-containing dehydrogenase.
    
 0.732
GAT35182.1
2-oxoisovalerate dehydrogenase E1 component.
   
  0.723
GAT32662.1
Hypothetical protein.
       0.675
GAT32663.1
lysophospholiPASe L1.
       0.675
GAT32664.1
Na+/melibiose symporter.
       0.640
GAT32660.1
PEP-CTERM protein-sorting domain-containing protein.
       0.528
rplN
Large subunit ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
 
   0.455
GAT34157.1
Acetoin utilization deacetylase AcuC.
    
  0.438
GAT32665.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.437
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.