STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT33103.1Heparinase II/III-like protein. (1170 aa)    
Predicted Functional Partners:
TSACC_137
PEP-CTERM protein-sorting domain-containing protein.
  
     0.658
GAT35497.1
Hypothetical protein.
  
     0.644
GAT34739.1
NAD(P)H dehydrogenase.
  
     0.624
GAT33830.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.607
GAT33451.1
Tetratricopeptide (TPR) repeat-containing protein.
 
    0.589
GAT34193.1
Tetratricopeptide repeat-containing protein.
 
 
 0.565
GAT35221.1
N-acylglucosamine 2-epimerase.
  
     0.539
GAT33104.1
S-formylglutathione hydrolase FrmB.
       0.515
GAT33775.1
TPR repeat-containing protein.
  
 
 0.510
smc
Chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.510
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.