STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT33104.1S-formylglutathione hydrolase FrmB. (261 aa)    
Predicted Functional Partners:
GAT33312.1
DNA-binding transcriptional regulator, FrmR family.
  
  
 0.666
GAT34419.1
Acyl transferase domain-containing protein.
  
 0.660
GAT33105.1
Hypothetical protein.
       0.608
GAT33675.1
lysophospholiPASe L1.
  
     0.580
GAT31805.1
lysophospholiPASe L1.
  
     0.549
GAT33546.1
NADH-quinone oxidoreductase subunit E.
    
 0.526
GAT35168.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
    
  0.525
GAT33103.1
Heparinase II/III-like protein.
       0.515
GAT33547.1
NADH-quinone oxidoreductase subunit F.
    
  0.512
GAT32253.1
lysophospholiPASe L1.
  
   
 0.433
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.