STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT31771.1O-antigen ligase like membrane protein. (635 aa)    
Predicted Functional Partners:
GAT34902.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.825
GAT35397.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.825
GAT31743.1
ADP-heptose:LPS heptosyltransferase.
  
 
  0.784
GAT31773.1
Capsular exopolysaccharide family.
 
  
 0.760
GAT35381.1
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
    
 0.743
GAT31774.1
Polysaccharide export outer membrane protein.
 
  
 0.701
GAT31772.1
Hypothetical protein.
       0.648
GAT31934.1
Autotransporter translocation and assembly factor TamB.
  
     0.645
GAT34889.1
O-antigen ligase.
  
     0.634
GAT32256.1
Verru_Chthon cassette protein D.
  
     0.624
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.