STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT33287.1Bacteriophage head to tail connecting protein. (544 aa)    
Predicted Functional Partners:
GAT33284.1
Hypothetical protein.
 
     0.859
GAT33293.1
Hypothetical protein.
 
    0.847
GAT33294.1
Hypothetical protein.
 
    0.840
GAT32515.1
Hypothetical protein.
 
    0.788
GAT35617.1
Hypothetical protein.
 
    0.788
GAT32516.1
Hypothetical protein.
 
    0.778
GAT35618.1
Hypothetical protein.
 
    0.778
GAT33290.1
Hypothetical protein.
       0.774
GAT33288.1
Hypothetical protein.
       0.773
GAT33289.1
Hypothetical protein.
       0.773
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.