STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT33339.1Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (361 aa)    
Predicted Functional Partners:
GAT34419.1
Acyl transferase domain-containing protein.
 
 0.924
GAT33654.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.837
TSACC_323
Non-ribosomal peptide synthetase component F.
  
 
 0.783
GAT33340.1
Alcohol dehydrogenase.
 
 
  0.696
GAT33338.1
Ferritin-like metal-binding protein YciE.
       0.524
GAT33926.1
Alkylresorcinol/alkylpyrone synthase.
    
 0.519
GAT35535.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase.
    
 0.424
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.