STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT33420.1Prepilin-type N-terminal cleavage/methylation domain-containing protein. (125 aa)    
Predicted Functional Partners:
GAT33424.1
Type II secretory pathway ATPase GspE/PulE.
  
   0.772
GAT33422.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
    
  0.723
GAT33421.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.697
GAT33423.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.687
GAT33417.1
Type IV pilus assembly protein PilC.
  
    0.636
GAT33425.1
Hypothetical protein.
       0.562
GAT33419.1
DNA-binding response regulator, NarL/FixJ family.
  
    0.529
GAT33409.1
Twitching motility protein PilT.
       0.527
GAT33410.1
Hypothetical protein.
       0.527
GAT33411.1
Hypothetical protein.
       0.527
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.