STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT33441.1Predicted oxidoreductase. (334 aa)    
Predicted Functional Partners:
GAT33439.1
Hypothetical protein.
       0.675
GAT33440.1
AraC-type DNA-binding protein.
       0.675
GAT33442.1
Mannose-6-phosphate isomerase, cupin superfamily.
       0.620
GAT33611.1
Predicted oxidoreductase of the aldo/keto reductase family.
  
     0.562
GAT35078.1
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.497
GAT35535.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase.
  
 0.488
GAT33436.1
Biopolymer transport protein TolQ.
       0.475
GAT33437.1
Biopolymer transport protein ExbD.
       0.475
GAT33438.1
TonB family C-terminal domain-containing protein.
       0.475
GAT34419.1
Acyl transferase domain-containing protein.
  
  
 0.404
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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