STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT34005.1Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. (297 aa)    
Predicted Functional Partners:
tatA
Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
 
     0.797
GAT33900.1
Maltose alpha-D-glucosyltransferase.
  
 
  0.776
GAT34006.1
Peroxiredoxin.
       0.773
GAT34007.1
Sialate O-acetylesterase.
       0.773
GAT33549.1
Transcription elongation factor, GreA/GreB family; Belongs to the GreA/GreB family.
 
     0.734
GAT32836.1
LPS assembly outer membrane protein LptD.
 
     0.708
GAT31788.1
Chaperone for outer membrane proteins, Skp family.
  
     0.694
GAT34748.1
Hypothetical protein.
  
     0.671
GAT34186.1
Hypothetical protein.
  
     0.667
GAT34358.1
TIGR03790 family protein.
  
     0.667
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.