STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT34138.1Heptosyltransferase-1. (325 aa)    
Predicted Functional Partners:
GAT35381.1
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
  
 0.943
GAT35126.1
Lipopolysaccharide heptosyltransferase II.
  
  
  0.794
GAT31743.1
ADP-heptose:LPS heptosyltransferase.
 
  
  0.783
GAT34137.1
Predicted phosphodiesterase.
       0.770
TSACC_355
Heptosyltransferase-3.
  
     0.770
GAT34107.1
ADP-heptose:LPS heptosyltransferase.
  
     0.747
GAT33326.1
ADP-heptose:LPS heptosyltransferase.
  
     0.741
GAT32813.1
D-beta-D-heptose 7-phosphate kinase.
 
  
  0.740
GAT33361.1
ADP-heptose:LPS heptosyltransferase.
  
     0.722
TSACC_177
Lauroyl/myristoyl acyltransferase.
  
  
  0.692
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.