STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT34691.1Hypothetical protein. (376 aa)    
Predicted Functional Partners:
GAT34690.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.773
TSACC_129
DUF1680 family protein.
  
     0.657
GAT34609.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.646
GAT35418.1
Heparinase II/III-like protein.
 
     0.641
GAT35450.1
Chondroitin AC lyase.
 
     0.632
GAT34586.1
alpha-L-fucosidase.
  
     0.624
GAT35560.1
Ricin-type beta-trefoil lectin domain-like.
  
     0.594
GAT34422.1
lysophospholiPASe L1.
  
     0.572
GAT32870.1
Alpha-1,2-mannosidase.
  
     0.547
GAT35460.1
Hypothetical protein.
  
     0.547
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
Server load: low (14%) [HD]