STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT32010.1Glycosyltransferase. (311 aa)    
Predicted Functional Partners:
GAT32995.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.874
GAT32020.1
Glycosyl transferase family 2.
 
     0.871
GAT32011.1
Glycosyltransferase.
 
    
0.841
GAT32012.1
DTDP-L-rhamnose 4-epimerase.
 
    0.818
GAT32002.1
Glycosyltransferase.
 
     0.800
GAT32013.1
Hypothetical protein.
       0.773
GAT31764.1
Glycosyl transferase family 2.
  
     0.771
GAT31744.1
Glycosyltransferase.
  
     0.769
GAT34897.1
Glycosyl transferase family 2.
  
     0.714
GAT35367.1
Glycosyltransferase, GT2 family.
  
  
  0.670
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.