STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT32178.1Phosphoglycolate phosphatase. (205 aa)    
Predicted Functional Partners:
GAT32179.1
Phosphoglycolate phosphatase.
 
  0.973
GAT31887.1
FAD/FMN-containing dehydrogenase.
    
 0.859
GAT33983.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase.
  
 
 0.857
GAT33758.1
Phosphoglycolate phosphatase.
  
 
  0.827
GAT32036.1
8-oxo-dGTP diphosphatase.
  
 0.807
GAT33931.1
Branched-chain amino acid aminotransferase.
  
 
 0.802
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.802
GAT31739.1
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
  
 
 0.797
GAT35144.1
Dihydropteroate synthase.
  
 
 0.797
GAT34933.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.790
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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