STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT32207.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
GAT32206.1
Hypothetical protein.
       0.741
xylB
Xylulokinase.
    
  0.740
GAT32205.1
Hypothetical protein.
       0.559
GAT32203.1
Endo-1,4-beta-xylanase, GH35 family.
       0.511
GAT32204.1
BNR repeat-like domain-containing protein.
       0.511
GAT32652.1
Sugar or nucleoside kinase, ribokinase family.
 
     0.487
GAT32202.1
PEP-CTERM protein-sorting domain-containing protein.
       0.471
TSACC_210
Predicted arabinose efflux permease, MFS family.
  
     0.469
GAT34436.1
Fucose permease.
  
     0.457
GAT32730.1
Tagaturonate reductase.
    
  0.407
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.