STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSACC_265Polar amino acid transport system permease protein. (238 aa)    
Predicted Functional Partners:
TSACC_266
Polar amino acid transport system substrate-binding protein.
 0.999
TSACC_264
Polar amino acid transport system ATP-binding protein.
 0.995
GAT33007.1
Polar amino acid transport system ATP-binding protein.
 0.984
GAT33006.1
Polar amino acid transport system substrate-binding protein.
 
0.695
GAT33498.1
Ligand-gated ion channel.
 
 0.638
GAT33803.1
Sulfate transport system ATP-binding protein; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.
 
 
  0.560
GAT33479.1
Ligand-gated ion channel.
 
 0.542
GAT32960.1
Ligand-gated ion channel.
 
 0.541
GAT32720.1
Putative ABC transport system ATP-binding protein.
 
 
 
  0.483
GAT33679.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.481
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.