STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT32283.1Glycosyltransferase WbsX. (390 aa)    
Predicted Functional Partners:
GAT32284.1
Beta-mannosidase.
       0.773
GAT32286.1
Beta-galactosidase.
 
     0.765
GAT32285.1
Hypothetical protein.
       0.697
GAT32287.1
Hypothetical protein.
       0.656
GAT32282.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
       0.623
GAT32771.1
Glycosyltransferase.
 
 
 0.513
GAT32280.1
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
     0.483
GAT34604.1
Right handed beta helix region.
  
     0.477
GAT32279.1
Alpha/beta hydrolase fold.
 
     0.475
GAT32289.1
Prepilin-type processing-associated H-X9-DG domain-containing protein.
 
     0.462
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.