STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT32407.1lysophospholiPASe L1. (231 aa)    
Predicted Functional Partners:
GAT32405.1
DNA-binding transcriptional regulator, LacI/PurR family.
       0.723
GAT32406.1
Beta-1,4-mannooligosaccharide/beta-1, 4-mannosyl-N-acetylglucosamine phosphorylase.
       0.723
GAT34601.1
BNR/Asp-box repeat-containing protein.
  
     0.719
GAT32260.1
BNR/Asp-box repeat-containing protein.
  
     0.715
GAT32402.1
Hypothetical protein.
       0.703
GAT32403.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
       0.703
GAT32404.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
       0.703
GAT35560.1
Ricin-type beta-trefoil lectin domain-like.
  
     0.686
GAT35446.1
Alginate lyase.
  
     0.650
GAT31595.1
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family.
  
     0.592
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.