Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT35207.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (274 aa)    
Predicted Functional Partners:
GAT34419.1
Acyl transferase domain-containing protein.
  
 0.900
GAT35202.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
    
0.820
GAT33654.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.797
GAT35199.1
2-keto-4-pentenoate hydratase.
   
  0.782
GAT32500.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.774
GAT35205.1
N-acetylneuraminate lyase; Belongs to the DapA family.
       0.773
GAT35206.1
Predicted dehydrogenase.
       0.773
GAT35201.1
Glucosamine-6-phosphate deaminase.
   
   0.769
GAT35200.1
N-acetylglucosamine-6-phosphate deacetylase.
       0.757
GAT35203.1
Creatinine amidohydrolase.
       0.757
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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