STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSACC_367CubicO group peptidase, beta-lactamase class C family. (385 aa)    
Predicted Functional Partners:
TSACC_368
Tetratricopeptide repeat-containing protein.
       0.774
GAT32695.1
Chitinase.
  
  
  0.770
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.741
TSACC_369
Glycosyltransferase.
       0.642
rplI
Large subunit ribosomal protein L9; Binds to the 23S rRNA.
       0.586
TSACC_370
Fructose-bisphosphate aldolase, class I.
       0.543
TSACC_365
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
       0.504
GAT32159.1
CubicO group peptidase, beta-lactamase class C family.
  
     0.464
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.