STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT35599.1Hypothetical protein. (117 aa)    
Predicted Functional Partners:
GAT35600.1
Hypothetical protein.
       0.671
GAT35596.1
Hypothetical protein.
       0.610
GAT35597.1
pDDEXK-like protein of unknown function.
       0.610
GAT35598.1
Hypothetical protein.
       0.610
GAT35601.1
Hypothetical protein.
       0.540
GAT35602.1
Putative quorum-sensing-regulated virulence factor.
       0.540
GAT35603.1
DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
       0.540
GAT35593.1
Helix-turn-helix domain-containing protein.
       0.417
GAT35594.1
Hypothetical protein.
       0.417
GAT35595.1
Hypothetical protein.
       0.417
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.