Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT35615.1Hypothetical protein. (301 aa)    
Predicted Functional Partners:
GAT35616.1
Hypothetical protein.
       0.678
GAT35618.1
Hypothetical protein.
       0.509
GAT35617.1
Hypothetical protein.
       0.508
GAT35619.1
Hypothetical protein.
       0.505
GAT35620.1
Hypothetical protein.
       0.505
GAT35614.1
Hypothetical protein.
       0.436
GAT35611.1
Bacteriophage head to tail connecting protein.
       0.411
GAT35612.1
Hypothetical protein.
       0.404
GAT35613.1
Hypothetical protein.
       0.404
Your Current Organism:
Terrimicrobium sacchariphilum
NCBI taxonomy Id: 690879
Other names: CGMCC 1.5168, JCM 17479, Spartobacteria bacterium NM5, T. sacchariphilum, Terrimicrobium sacchariphilum Qiu et al. 2014 emend. Hahnke et al. 2016, strain NM-5
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