Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANQ20263.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (532 aa)    
Predicted Functional Partners:
ANQ21355.1
In Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.950
ANQ21179.1
Cytochrome d ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.906
ANQ20264.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.856
ANQ21178.1
Cytochrome d terminal oxidase subunit 1; Part of the aerobic respiratory chain; catalyzes the ubiquinol to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.850
ANQ20262.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
ANQ21631.1
Cytochrome biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.519
ANQ20261.1
Heme utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.518
ANQ23059.1
Pilus assembly protein FlpD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.475
ANQ20254.1
Pilus assembly protein CpaE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.475
ANQ20255.1
Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.475
Your Current Organism:
Vibrio natriegens
NCBI taxonomy Id: 691
Other names: ATCC 14048, Beneckea natriegens, CAIM 12, CCUG 16371, CCUG 4980 A, CIP 103193, DSM 759, IFO 15636, LMG 10935, LMG:10935, NBRC 15636, NCCB 73019, NCMB 857, NCMB:857, NCTC 11319, Pseudomonas natriegens, V. natriegens
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