Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANQ20657.1 | ANQ22337.1 | BA893_02760 | BA893_11875 | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.453 |
| ANQ20657.1 | ANQ22538.1 | BA893_02760 | BA893_12940 | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.426 |
| ANQ20657.1 | ANQ22772.1 | BA893_02760 | BA893_14370 | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.539 |
| ANQ20657.1 | ANQ22830.1 | BA893_02760 | BA893_14660 | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.606 |
| ANQ20657.1 | ANQ22843.1 | BA893_02760 | BA893_14785 | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
| ANQ20657.1 | ftsZ | BA893_02760 | BA893_02380 | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.412 |
| ANQ20657.1 | mltG | BA893_02760 | BA893_10460 | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.412 |
| ANQ20657.1 | mtgA | BA893_02760 | BA893_16395 | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.564 |
| ANQ22337.1 | ANQ20657.1 | BA893_11875 | BA893_02760 | RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.453 |
| ANQ22337.1 | ANQ22772.1 | BA893_11875 | BA893_14370 | RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology. | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.434 |
| ANQ22337.1 | ANQ22830.1 | BA893_11875 | BA893_14660 | RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.480 |
| ANQ22337.1 | ftsZ | BA893_11875 | BA893_02380 | RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.571 |
| ANQ22538.1 | ANQ20657.1 | BA893_12940 | BA893_02760 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.426 |
| ANQ22538.1 | ANQ22772.1 | BA893_12940 | BA893_14370 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.947 |
| ANQ22538.1 | ANQ22830.1 | BA893_12940 | BA893_14660 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.558 |
| ANQ22538.1 | ANQ22843.1 | BA893_12940 | BA893_14785 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
| ANQ22538.1 | ftsZ | BA893_12940 | BA893_02380 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.439 |
| ANQ22538.1 | mltG | BA893_12940 | BA893_10460 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | ABC transporter substrate-binding protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.549 |
| ANQ22772.1 | ANQ20657.1 | BA893_14370 | BA893_02760 | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.539 |
| ANQ22772.1 | ANQ22337.1 | BA893_14370 | BA893_11875 | Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.434 |
page 1 of 3