STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaML-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. (104 aa)    
Predicted Functional Partners:
rhaA
L-rhamnose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the rhamnose isomerase family.
 
 
 0.991
ANQ20743.1
Rhamnulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.955
ANQ20741.1
Rhamnulose-1-phosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.868
ANQ20744.1
Nucleoside transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.789
xylB
Xylulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.774
ANQ22370.1
MFS transporter TsgA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.751
fucK
L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family.
  
  
 0.744
ANQ21881.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
   
  
 0.697
ANQ20745.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.605
ANQ23893.1
2-pyrone-4,6-dicarboxylate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.457
Your Current Organism:
Vibrio natriegens
NCBI taxonomy Id: 691
Other names: ATCC 14048, Beneckea natriegens, CAIM 12, CCUG 16371, CCUG 4980 A, CIP 103193, DSM 759, IFO 15636, LMG 10935, LMG:10935, NBRC 15636, NCCB 73019, NCMB 857, NCMB:857, NCTC 11319, Pseudomonas natriegens, V. natriegens
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