Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANQ20901.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)    
Predicted Functional Partners:
ANQ20902.1
TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.822
ANQ20903.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.664
ANQ20904.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.664
ANQ20905.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.664
ANQ20906.1
CBS domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.664
ANQ20908.1
YfcE family phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.587
ANQ20899.1
Paraslipin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.559
ANQ20898.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.505
ANQ20900.1
Co-chaperone YbbN; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.490
ANQ24315.1
Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.445
Your Current Organism:
Vibrio natriegens
NCBI taxonomy Id: 691
Other names: ATCC 14048, Beneckea natriegens, CAIM 12, CCUG 16371, CCUG 4980 A, CIP 103193, DSM 759, IFO 15636, LMG 10935, LMG:10935, NBRC 15636, NCCB 73019, NCMB 857, NCMB:857, NCTC 11319, Pseudomonas natriegens, V. natriegens
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