Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANQ21503.1DNA helicase RuvA; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)    
Predicted Functional Partners:
ANQ21504.1
Phenoxybenzoate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
ANQ21505.1
3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
ANQ21506.1
Bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
ANQ21507.1
3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
ANQ21508.1
3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
ANQ23779.1
Nitrile hydratase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.422
ANQ23778.1
Nitrile hydratase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
ANQ23550.1
Ethanolamine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.410
ANQ23777.1
Nitrile hydratase accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.400
Your Current Organism:
Vibrio natriegens
NCBI taxonomy Id: 691
Other names: ATCC 14048, Beneckea natriegens, CAIM 12, CCUG 16371, CCUG 4980 A, CIP 103193, DSM 759, IFO 15636, LMG 10935, LMG:10935, NBRC 15636, NCCB 73019, NCMB 857, NCMB:857, NCTC 11319, Pseudomonas natriegens, V. natriegens
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