Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANQ21789.1NADH:flavorubredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase family. (382 aa)    
Predicted Functional Partners:
ANQ21790.1
Detoxifies nitric oxide using NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.976
ANQ24006.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     0.922
ANQ24326.1
Formate dehydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
      0.861
napA
Nitrate reductase catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
    
 0.766
ANQ21788.1
Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.717
ANQ21506.1
Bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.693
ANQ21791.1
Nitric oxide reductase transcription regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.613
ANQ24003.1
Nitrite reductase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.501
nirD
Nitrite reductase small subunit; Involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.496
ANQ24441.1
Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.455
Your Current Organism:
Vibrio natriegens
NCBI taxonomy Id: 691
Other names: ATCC 14048, Beneckea natriegens, CAIM 12, CCUG 16371, CCUG 4980 A, CIP 103193, DSM 759, IFO 15636, LMG 10935, LMG:10935, NBRC 15636, NCCB 73019, NCMB 857, NCMB:857, NCTC 11319, Pseudomonas natriegens, V. natriegens
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