Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ANQ21971.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)    
Predicted Functional Partners:
ANQ23149.1
Ubiquitin--protein ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.761
ANQ21970.1
Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
       0.589
gcvP
Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
 
  
 0.555
ANQ20872.1
Flagellar biosynthesis protein FlgP; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
ANQ20870.1
Flagellar basal-body protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
ANQ24068.1
9-hexadecenoic acid cis-trans isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
ANQ22731.1
MSHA biogenesis protein MshI; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.467
ANQ22764.1
Cell division protein DamX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.450
ANQ22472.1
Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.438
ANQ22719.1
MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.426
Your Current Organism:
Vibrio natriegens
NCBI taxonomy Id: 691
Other names: ATCC 14048, Beneckea natriegens, CAIM 12, CCUG 16371, CCUG 4980 A, CIP 103193, DSM 759, IFO 15636, LMG 10935, LMG:10935, NBRC 15636, NCCB 73019, NCMB 857, NCMB:857, NCTC 11319, Pseudomonas natriegens, V. natriegens
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