Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANQ22235.1Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family. (925 aa)    
Predicted Functional Partners:
ANQ22234.1
Phosphohistidine phosphatase SixA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.683
ANQ22318.1
TIGR03503 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.609
ANQ23160.1
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.589
ANQ20870.1
Flagellar basal-body protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
ANQ20872.1
Flagellar biosynthesis protein FlgP; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
ANQ21107.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.509
ANQ22236.1
CG2 omega domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.497
ANQ22263.1
Flagellar biosynthesis protein FlhA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.490
ANQ23106.1
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
ANQ21589.1
Molybdopterin-guanine dinucleotide biosynthesis protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
Your Current Organism:
Vibrio natriegens
NCBI taxonomy Id: 691
Other names: ATCC 14048, Beneckea natriegens, CAIM 12, CCUG 16371, CCUG 4980 A, CIP 103193, DSM 759, IFO 15636, LMG 10935, LMG:10935, NBRC 15636, NCCB 73019, NCMB 857, NCMB:857, NCTC 11319, Pseudomonas natriegens, V. natriegens
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