Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ANQ22707.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)    
Predicted Functional Partners:
ANQ23106.1
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.542
ANQ23160.1
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
ANQ22821.1
Flagellar protein MotX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.502
ANQ21107.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
ANQ21119.1
PrkA family serine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.495
ANQ22679.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
       0.490
ANQ21118.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.
   
    0.472
ANQ21117.1
SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.464
ANQ20871.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.459
ANQ20464.1
TIGR03899 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.436
Your Current Organism:
Vibrio natriegens
NCBI taxonomy Id: 691
Other names: ATCC 14048, Beneckea natriegens, CAIM 12, CCUG 16371, CCUG 4980 A, CIP 103193, DSM 759, IFO 15636, LMG 10935, LMG:10935, NBRC 15636, NCCB 73019, NCMB 857, NCMB:857, NCTC 11319, Pseudomonas natriegens, V. natriegens
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