Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
ANQ22950.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)    
Predicted Functional Partners:
ANQ22948.1
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.820
ANQ22949.1
Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.806
ANQ22947.1
MFS transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.703
ANQ22306.1
Arsenate reductase (glutaredoxin); Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.611
ANQ22951.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.534
CopA
Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.528
rhtB
Homoserine/homoserine lactone efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.509
ANQ23409.1
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.506
ANQ24583.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.485
ANQ24582.1
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.430
Your Current Organism:
Vibrio natriegens
NCBI taxonomy Id: 691
Other names: ATCC 14048, Beneckea natriegens, CAIM 12, CCUG 16371, CCUG 4980 A, CIP 103193, DSM 759, IFO 15636, LMG 10935, LMG:10935, NBRC 15636, NCCB 73019, NCMB 857, NCMB:857, NCTC 11319, Pseudomonas natriegens, V. natriegens
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