STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ANQ24047.1Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. (178 aa)    
Predicted Functional Partners:
ANQ20973.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.587
rnfG-2
Electron transport complex subunit G; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
 
   
 0.552
ANQ24011.1
Dinitrogenase iron-molybdenum cofactor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.491
rnfC-2
Electron transporter RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
       0.491
ANQ24041.1
Electron transporter RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
     
 0.488
ANQ24036.1
Nitrogen fixation protein NifQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.486
rnfD-2
RnfABCDGE type electron transport complex subunit D; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
       0.486
rnfE-2
Electron transport complex subunit RsxE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
       0.486
ANQ24046.1
Protein RnfH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0125 (RnfH) family.
       0.486
ANQ24015.1
Nitrogen fixation protein NifX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.485
Your Current Organism:
Vibrio natriegens
NCBI taxonomy Id: 691
Other names: ATCC 14048, Beneckea natriegens, CAIM 12, CCUG 16371, CCUG 4980 A, CIP 103193, DSM 759, IFO 15636, LMG 10935, LMG:10935, NBRC 15636, NCCB 73019, NCMB 857, NCMB:857, NCTC 11319, Pseudomonas natriegens, V. natriegens
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