STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_06223RanBD1 domain-containing protein. (219 aa)    
Predicted Functional Partners:
H696_02302
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.999
H696_03841
Uncharacterized protein.
 
 
 0.997
H696_05316
TROVE domain-containing protein.
   
 0.989
H696_05167
Nuclear pore protein.
   
 0.983
H696_02952
Uncharacterized protein.
   
 0.981
H696_01081
Nup54 domain-containing protein.
   
 0.980
H696_02418
Ubiquitin-like domain-containing protein.
   
 0.979
H696_05823
Importin N-terminal domain-containing protein.
   
 
 0.973
H696_01649
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.970
H696_03813
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
 
 0.969
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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