STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_04753Vps8 domain-containing protein. (2315 aa)    
Predicted Functional Partners:
H696_02818
Uncharacterized protein; Belongs to the VPS16 family.
    
 
 0.997
H696_01381
Pep3_Vps18 domain-containing protein.
    
 
 0.997
H696_01059
VPS11_C domain-containing protein.
    
 
 0.997
H696_02903
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.989
H696_02109
Uncharacterized protein.
   
 
 0.975
H696_03789
Ras-like protein Rab-5A.
    
 
 0.792
H696_01782
Ras-like protein Rab-22A.
    
 
 0.792
H696_01651
Uncharacterized protein; Belongs to the VPS41 family.
   
 
 0.744
H696_00434
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
  
 0.611
H696_01575
Uncharacterized protein.
      
 0.590
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.