STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_04782Uncharacterized protein. (1261 aa)    
Predicted Functional Partners:
H696_00247
Ubiquitin-40S ribosomal protein S27a.
    
  0.892
H696_02021
Ubiquitin-60S ribosomal protein L40.
    
  0.858
H696_01735
Uncharacterized protein.
   
  0.719
H696_05331
UV excision repair protein Rad23.
    
  0.712
H696_04837
Ubiquitin-like domain-containing protein.
    
  0.712
H696_00240
Uncharacterized protein.
   
 
 0.711
H696_00530
SH3 domain-containing protein.
   
 
  0.672
H696_05927
Uncharacterized protein.
   
 
 0.668
H696_02230
Uncharacterized protein; Belongs to the peptidase S9B family.
    
 
 0.659
H696_01323
Uncharacterized protein.
   
 
 0.656
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.