STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_04925ULP_PROTEASE domain-containing protein. (1401 aa)    
Predicted Functional Partners:
H696_02418
Ubiquitin-like domain-containing protein.
    
 0.993
H696_02368
Sentrin-specific protease 1.
    
0.940
H696_04219
Uncharacterized protein.
   
 
 0.803
H696_04921
Ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.786
H696_04577
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
    
 
 0.756
H696_05168
Uncharacterized protein.
   
 0.743
H696_03740
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.738
H696_04102
Uncharacterized protein.
    
 0.720
H696_04105
Ipi1_N domain-containing protein.
    
 0.720
H696_03576
CLP1_P domain-containing protein.
    
 0.702
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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