STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_03894Rubis-subs-bind domain-containing protein. (814 aa)    
Predicted Functional Partners:
H696_02140
AAA domain-containing protein.
    
 0.642
H696_00412
MINDY_DUB domain-containing protein.
    
 0.642
H696_06052
Succinyl-CoA synthetase beta subunit.
   
 0.564
H696_05727
Methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
     
 0.539
H696_01641
Lactoylglutathione lyase.
     
 0.539
H696_04899
Histone H3; Belongs to the histone H3 family.
    
 0.534
H696_00716
Post-SET domain-containing protein.
    
 0.526
H696_04846
Phosphoglycerate kinase.
     
 0.522
H696_00380
SPRY domain-containing protein.
     
 0.502
H696_03300
WD_REPEATS_REGION domain-containing protein.
     
 0.501
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.