STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_02615Asparaginyl-tRNA synthetase. (547 aa)    
Predicted Functional Partners:
H696_05558
Prolyl-tRNA synthetase.
  
 0.999
H696_00920
ERCC4 domain-containing protein.
   
 0.982
H696_01325
Uncharacterized protein.
   
 0.980
H696_01824
ERCC4 domain-containing protein.
   
 0.978
H696_02202
Uncharacterized protein.
   
 0.956
H696_02154
GatB_Yqey domain-containing protein.
 
 0.953
H696_06032
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.944
H696_03561
tRNA-binding domain-containing protein.
  
 0.924
H696_00675
Uncharacterized protein.
  
 0.898
H696_00083
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.868
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.