STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_02620Uncharacterized protein. (211 aa)    
Predicted Functional Partners:
H696_00876
RRM domain-containing protein.
   
 
 0.991
H696_04532
Brix domain-containing protein.
   
 
 0.982
H696_03853
Uncharacterized protein.
   
 
 0.980
H696_03594
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 
 0.980
H696_01633
Uncharacterized protein.
   
 
 0.979
H696_00326
50S ribosomal protein L24e.
   
 
 0.976
H696_04530
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
   0.975
H696_05328
Ribosome biogenesis protein N.
   
 
 0.973
H696_01118
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
 0.972
H696_03873
50S ribosomal protein L7e.
   
 
 0.968
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.