STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_02707ThiF domain-containing protein. (463 aa)    
Predicted Functional Partners:
H696_03647
Autophagy-like protein 3.
    
 0.999
H696_00273
Autophagy-related protein.
   
 0.999
H696_04433
HECT domain-containing protein.
    
 0.990
H696_02069
Lipase_3 domain-containing protein.
   
 
 0.976
H696_03646
Autophagy_C domain-containing protein.
    
 0.961
H696_01965
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.938
H696_05096
Uncharacterized protein.
    
 0.911
H696_03571
WD_REPEATS_REGION domain-containing protein.
     
 0.867
H696_01529
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.855
H696_00425
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.852
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.