STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_02176Helicase ATP-binding domain-containing protein. (952 aa)    
Predicted Functional Partners:
H696_04452
ANK_REP_REGION domain-containing protein.
   
 0.998
H696_00245
Uncharacterized protein.
   
 0.915
H696_00823
DNA_mis_repair domain-containing protein.
   
 0.904
H696_03305
UmuC domain-containing protein.
   
 0.888
H696_01979
RING-type domain-containing protein.
    
 0.871
H696_01179
VWFA domain-containing protein.
    
 0.871
H696_01754
BSD domain-containing protein.
    
 0.871
H696_02387
Uncharacterized protein.
    
 0.870
H696_05011
CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.
    
 0.863
H696_05188
Uncharacterized protein.
    
 0.861
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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