STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_02238TPR_REGION domain-containing protein. (753 aa)    
Predicted Functional Partners:
H696_00488
Uncharacterized protein.
    
 0.999
H696_00619
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.943
H696_03303
Uncharacterized protein.
    
 0.912
H696_05316
TROVE domain-containing protein.
    
 0.848
H696_02996
CDC73_C domain-containing protein.
    
 0.811
H696_02317
Uncharacterized protein.
    
 0.810
H696_00884
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.810
H696_05809
DOC domain-containing protein.
    
 0.808
H696_02724
Uncharacterized protein.
    
 0.807
H696_01661
RING-type domain-containing protein.
    
 0.804
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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