STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_00297Uncharacterized protein. (2287 aa)    
Predicted Functional Partners:
H696_06150
Pre-mRNA-processing-splicing factor 8.
   
 0.975
H696_02107
PRP1_N domain-containing protein.
   
 0.962
H696_05631
zf-C2HC5 domain-containing protein.
    
 
 0.952
H696_03044
Small nuclear ribonucleoprotein Sm D3.
   
 0.936
H696_05841
Small nuclear ribonucleoprotein Sm D2.
   
 0.935
H696_00401
Small nuclear ribonucleoprotein F.
   
 0.933
H696_00327
Thioredoxin-like protein 4A.
    
 0.931
H696_03062
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.930
H696_04889
Small nuclear ribonucleoprotein G.
   
  0.929
H696_03074
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.923
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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