STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_00445Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (253 aa)    
Predicted Functional Partners:
H696_00613
50S ribosomal protein L23Ae.
  
 0.982
H696_03873
50S ribosomal protein L7e.
  
 0.980
H696_03537
Uncharacterized protein.
  
 0.980
H696_01118
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.980
H696_00090
50S ribosomal protein L5e.
  
 0.980
H696_01301
50S ribosomal protein LP1; Belongs to the eukaryotic ribosomal protein P1/P2 family.
  
 0.980
H696_03349
50S ribosomal protein L9e.
  
 0.979
H696_04530
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.978
H696_03585
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.977
H696_05003
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.975
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.