H696_00168 protein (Fonticula alba) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

H696_00168

Importin N-terminal domain-containing protein. (1024 aa)

Predicted Functional Partners:

H696_03740

0.996

H696_02302

0.940

H696_05823

0.838

H696_01946

0.736

H696_00829

0.733

H696_00752

0.684

H696_06223

0.646

H696_04194

0.643

H696_02149

0.602

H696_03327

0.600

Your Current Organism:

Fonticula alba

NCBI taxonomy Id: 691883
Other names: F. alba

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H696_00168	H696_00752	A0A058ZGG1	A0A058ZFP3	Importin N-terminal domain-containing protein.	Xpo1 domain-containing protein.	0.684
H696_00168	H696_00829	A0A058ZGG1	A0A058ZH73	Importin N-terminal domain-containing protein.	Xpo1 domain-containing protein.	0.733
H696_00168	H696_01946	A0A058ZGG1	A0A058Z9V2	Importin N-terminal domain-containing protein.	Importin N-terminal domain-containing protein.	0.736
H696_00168	H696_02149	A0A058ZGG1	A0A058ZCN3	Importin N-terminal domain-containing protein.	Importin N-terminal domain-containing protein.	0.602
H696_00168	H696_02302	A0A058ZGG1	A0A058ZAH6	Importin N-terminal domain-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.940
H696_00168	H696_03327	A0A058ZGG1	A0A058Z6G0	Importin N-terminal domain-containing protein.	Uncharacterized protein.	0.600
H696_00168	H696_03740	A0A058ZGG1	A0A058Z5U1	Importin N-terminal domain-containing protein.	Importin subunit alpha; Belongs to the importin alpha family.	0.996
H696_00168	H696_04194	A0A058ZGG1	A0A058Z3D2	Importin N-terminal domain-containing protein.	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	0.643
H696_00168	H696_05823	A0A058ZGG1	A0A058Z0C9	Importin N-terminal domain-containing protein.	Importin N-terminal domain-containing protein.	0.838
H696_00168	H696_06223	A0A058ZGG1	A0A058YZD4	Importin N-terminal domain-containing protein.	RanBD1 domain-containing protein.	0.646
H696_00752	H696_00168	A0A058ZFP3	A0A058ZGG1	Xpo1 domain-containing protein.	Importin N-terminal domain-containing protein.	0.684
H696_00752	H696_01946	A0A058ZFP3	A0A058Z9V2	Xpo1 domain-containing protein.	Importin N-terminal domain-containing protein.	0.470
H696_00752	H696_02149	A0A058ZFP3	A0A058ZCN3	Xpo1 domain-containing protein.	Importin N-terminal domain-containing protein.	0.582
H696_00752	H696_02302	A0A058ZFP3	A0A058ZAH6	Xpo1 domain-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.991
H696_00752	H696_03327	A0A058ZFP3	A0A058Z6G0	Xpo1 domain-containing protein.	Uncharacterized protein.	0.542
H696_00752	H696_03740	A0A058ZFP3	A0A058Z5U1	Xpo1 domain-containing protein.	Importin subunit alpha; Belongs to the importin alpha family.	0.577
H696_00752	H696_04194	A0A058ZFP3	A0A058Z3D2	Xpo1 domain-containing protein.	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	0.717
H696_00752	H696_05823	A0A058ZFP3	A0A058Z0C9	Xpo1 domain-containing protein.	Importin N-terminal domain-containing protein.	0.632
H696_00752	H696_06223	A0A058ZFP3	A0A058YZD4	Xpo1 domain-containing protein.	RanBD1 domain-containing protein.	0.721
H696_00829	H696_00168	A0A058ZH73	A0A058ZGG1	Xpo1 domain-containing protein.	Importin N-terminal domain-containing protein.	0.733