STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H696_00617CHY-type domain-containing protein. (110 aa)    
Predicted Functional Partners:
H696_03305
UmuC domain-containing protein.
    
 0.741
H696_00247
Ubiquitin-40S ribosomal protein S27a.
    
 0.715
H696_05331
UV excision repair protein Rad23.
    
 0.640
H696_04837
Ubiquitin-like domain-containing protein.
    
 0.640
H696_01735
Uncharacterized protein.
    
 0.640
H696_03442
DNA damage checkpoint protein rad24; Belongs to the 14-3-3 family.
 
    
 0.630
H696_03511
Replication factor C subunit 3/5.
   
 
  0.598
H696_02707
ThiF domain-containing protein.
     
 0.502
H696_00612
ThiF domain-containing protein.
     
 0.502
H696_03713
Ubiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.409
Your Current Organism:
Fonticula alba
NCBI taxonomy Id: 691883
Other names: F. alba
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.