STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG55_01345Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)    
Predicted Functional Partners:
BG55_01360
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.941
BG55_01350
Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.898
BG55_01340
Involved in molybdenum transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.
 
     0.861
BG55_01335
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.854
BG55_01355
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.854
BG55_01055
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.831
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.702
aas
acyl-ACP synthetase; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.593
BG55_15470
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.563
BG55_15475
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.563
Your Current Organism:
Erwinia mallotivora
NCBI taxonomy Id: 69222
Other names: ATCC 29573, CFBP 2503, CIP 105197, DSM 4565, E. mallotivora, ICMP 5705, LMG 2708, LMG:2708, NCPPB 2851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.