STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG55_03730Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)    
Predicted Functional Partners:
BG55_03720
ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.911
BG55_03725
Conjugal transfer protein TraR; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.836
BG55_03740
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.808
BG55_12270
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.768
BG55_18290
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.744
BG55_06645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.739
BG55_11800
Pilus assembly protein PilL; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
BG55_18700
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.704
BG55_15705
Autoinducer synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.650
BG55_06065
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.639
Your Current Organism:
Erwinia mallotivora
NCBI taxonomy Id: 69222
Other names: ATCC 29573, CFBP 2503, CIP 105197, DSM 4565, E. mallotivora, ICMP 5705, LMG 2708, LMG:2708, NCPPB 2851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.